Transcript: ENST00000272902.5 SUMF1-001

Description

sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:20376]

Gene Synonyms

AAPA3037, FGE, UNQ3037

Location

Chromosome 3: 4,402,830-4,508,965 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 52196 variant alleles and maps to 333 oligo probes.

Gene

This transcript is a product of gene ENSG00000144455.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272902.5	SUMF1-001	2159	374aa	ENSP00000272902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2564	Q8NBK3	NM_182760.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383843.5	SUMF1-005	1447	349aa	ENSP00000373355.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54548	Q8NBK3	NM_001164674.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534863.1	SUMF1-201	1281	426aa	ENSP00000440421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405420.2	SUMF1-002	1128	354aa	ENSP00000384977.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54549	Q8NBK3	NM_001164675.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458465.2	SUMF1-003	1102	242aa	ENSP00000410060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PF05	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448413.1	SUMF1-004	3150	426aa	ENSP00000404384.1	Nonsense mediated decay		F5GXA0	-	-
ENST00000470751.1	SUMF1-008	2344	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469888.1	SUMF1-009	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484993.1	SUMF1-010	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,159 bps, Translation length: 374 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NBK3

CCDS

This transcript is a member of the Human CCDS set: CCDS2564

Version

ENST00000272902.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206591 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000272902.5 SUMF1-001

Summary