Transcript: ENST00000269397.4 CBX4-001

Description

chromobox homolog 4 [Source:HGNC Symbol;Acc:1554]

Gene Synonyms

NBP16, PC2, hPC2

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 4146 variant alleles and maps to 512 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269397.4	CBX4-001	2664	560aa	ENSP00000269397.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32758	O00257	NM_003655.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448310.1	CBX4-002	718	60aa	ENSP00000415348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCW6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495122.1	CBX4-004	490	90aa	ENSP00000461198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494546.1	CBX4-003	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,664 bps, Translation length: 560 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00257

CCDS

This transcript is a member of the Human CCDS set: CCDS32758

Version

ENST00000269397.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318007 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.