Transcript: ENST00000543482.1 MCTP2-001

Description

multiple C2 domains, transmembrane 2 [Source:HGNC Symbol;Acc:25636]

Gene Synonyms

FLJ11175, FLJ33303, RP11-4F5.2

Location

Chromosome 15: 94,774,767-94,901,835 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 63079 variant alleles and maps to 257 oligo probes.

Gene

This transcript is a product of gene ENSG00000140563.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357742.4	MCTP2-002	3965	878aa	ENSP00000350377.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32338	Q6DN12 Q9NPN6	NM_018349.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451018.3	MCTP2-009	2472	823aa	ENSP00000395109.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53975	Q6DN12 Q9NPN6	NM_001159643.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000331706.4	MCTP2-201	2222	306aa	ENSP00000329646.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53976	Q6DN12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557742.1	MCTP2-003	1957	306aa	ENSP00000454847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53976	Q6DN12	NM_001159644.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543482.1	MCTP2-001	1422	396aa	ENSP00000438521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H415	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456504.1	MCTP2-004	4493	199aa	ENSP00000388887.1	Nonsense mediated decay		Q6DN12	-	-
ENST00000449432.3	MCTP2-006	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561608.1	MCTP2-010	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556363.1	MCTP2-005	4374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557505.1	MCTP2-008	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,422 bps, Translation length: 396 residues

Version

ENST00000543482.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000414951 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000543482.1 MCTP2-001

Summary