Transcript: ENST00000268148.8 DET1-001

Description

de-etiolated homolog 1 (Arabidopsis) [Source:HGNC Symbol;Acc:25477]

Gene Synonyms

FLJ10103

Location

Chromosome 15: 89,055,714-89,089,906 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 18114 variant alleles and maps to 431 oligo probes.

Gene

This transcript is a product of gene ENSG00000140543.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564406.1	DET1-007	2315	561aa	ENSP00000456340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45343	Q7L5Y6	NM_017996.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268148.8	DET1-001	2267	550aa	ENSP00000268148.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45344	Q7L5Y6	NM_001144074.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444300.1	DET1-201	2154	561aa	ENSP00000408994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45343	Q7L5Y6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558413.1	DET1-004	583	94aa	ENSP00000453900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557842.1	DET1-002	2258	67aa	ENSP00000452856.1	Nonsense mediated decay		H0YK09	-	-
ENST00000557837.1	DET1-003	1925	67aa	ENSP00000452613.1	Nonsense mediated decay		H0YK09	-	-
ENST00000559656.1	DET1-006	161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,267 bps, Translation length: 550 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7L5Y6

CCDS

This transcript is a member of the Human CCDS set: CCDS45344

Version

ENST00000268148.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000415442 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000268148.8 DET1-001

Summary