Transcript: ENST00000496477.1 ITGAV-005

Description

integrin, alpha V [Source:HGNC Symbol;Acc:6150]

Gene Synonyms

CD51, MSK8, VNRA, VTNR

Location

Chromosome 2: 187,532,375-187,540,365 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3587 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000138448.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261023.3	ITGAV-001	7030	1048aa	ENSP00000261023.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2292	L7RXH0 P06756	NM_002210.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374907.3	ITGAV-003	6903	1012aa	ENSP00000364042.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46470	P06756	NM_001145000.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433736.2	ITGAV-004	3288	1002aa	ENSP00000404291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46471	P06756	NM_001144999.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430709.1	ITGAV-008	736	136aa	ENSP00000389442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474571.1	ITGAV-011	333	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496854.1	ITGAV-007	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460641.1	ITGAV-006	604	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496477.1	ITGAV-005	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 437 bps,

Version

ENST00000496477.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334605 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000496477.1 ITGAV-005

Summary