Transcript: ENST00000561065.1 LMX1B-003

Description

LIM homeobox transcription factor 1, beta [Source:HGNC Symbol;Acc:6654]

Gene Synonyms

LMX1.2, NPS1, RP11-489N22.3

Location

Chromosome 9: 129,376,748-129,458,828 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 38202 variant alleles and maps to 322 oligo probes.

Gene

This transcript is a product of gene ENSG00000136944.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355497.5	LMX1B-201	5809	406aa	ENSP00000347684.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55343	B7ZLH2 O60663 Q9UE66	NM_001174146.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425646.2	LMX1B-202	5776	372aa	ENSP00000390923.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60663 Q9UE66	NM_002316.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373474.4	LMX1B-002	1314	402aa	ENSP00000362573.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55342	O60663 Q6ISE0 Q9UE66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561065.1	LMX1B-003	1300	383aa	ENSP00000453580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZLH2 Q9UE66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526117.1	LMX1B-001	1195	395aa	ENSP00000436930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6866	O60663 Q9UE66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,300 bps, Translation length: 383 residues

Version

ENST00000561065.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415751 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000561065.1 LMX1B-003

Summary