Transcript: ENST00000360190.4 CDK5RAP2-014

Description

CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:18672]

Gene Synonyms

C48, CEP215, Cep215, FLJ10867, KIAA1633, MCPH3

Location

Chromosome 9: 123,151,154-123,342,436 reverse strand.

About this transcript

This transcript has 37 exons, is annotated with 21 domains and features, is associated with 80146 variant alleles and maps to 1006 oligo probes.

Gene

This transcript is a product of gene ENSG00000136861.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349780.4	CDK5RAP2-005	6228	1893aa	ENSP00000343818.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6823	C9K0C9 F8WBJ0 Q96SN8	NM_018249.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360822.3	CDK5RAP2-202	6134	1861aa	ENSP00000354065.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMJ5 C9K0C9 F8WBJ0 Q96SN8	NM_001272039.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359309.3	CDK5RAP2-201	6107	1852aa	ENSP00000352258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0C9 F8WBJ0 Q5JTU8 Q96SN8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360190.4	CDK5RAP2-014	5985	1814aa	ENSP00000353317.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43871	C9K0C9 F8WBJ0 Q96SN8	NM_001011649.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416449.1	CDK5RAP2-008	3902	1287aa	ENSP00000400395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMJ5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000425647.1	CDK5RAP2-013	2747	903aa	ENSP00000409941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JTU8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482047.1	CDK5RAP2-017	565	133aa	ENSP00000419640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0C9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473282.2	CDK5RAP2-012	5956	460aa	ENSP00000419265.1	Nonsense mediated decay		C9K0C9 F8WF55	-	-
ENST00000480112.1	CDK5RAP2-016	5826	749aa	ENSP00000418418.1	Nonsense mediated decay		C9K0C9 F8WCI3	-	-
ENST00000481266.1	CDK5RAP2-010	970	275aa	ENSP00000417925.1	Nonsense mediated decay		F8WBJ0	-	-
ENST00000480467.1	CDK5RAP2-002	931	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000433194.2	CDK5RAP2-003	815	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479584.1	CDK5RAP2-009	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468989.1	CDK5RAP2-018	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472883.1	CDK5RAP2-011	389	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483412.1	CDK5RAP2-015	6235	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484546.1	CDK5RAP2-001	1269	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495406.1	CDK5RAP2-006	635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474262.1	CDK5RAP2-004	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491334.1	CDK5RAP2-007	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 5,985 bps, Translation length: 1,814 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96SN8

CCDS

This transcript is a member of the Human CCDS set: CCDS43871

Version

ENST00000360190.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355367 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000360190.4 CDK5RAP2-014

Summary