Transcript: ENST00000349258.4 THSD1-002

Description

thrombospondin, type I, domain containing 1 [Source:HGNC Symbol;Acc:17754]

Gene Synonyms

TMTSP, UNQ3010

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 12110 variant alleles and maps to 338 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349258.4	THSD1-002	3186	799aa	ENSP00000340650.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9433	Q9NS62	NM_199263.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258613.4	THSD1-001	2962	852aa	ENSP00000258613.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9432	F5H419 Q9NS62	NM_018676.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544466.1	THSD1-201	1892	473aa	ENSP00000438512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H419	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,186 bps, Translation length: 799 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NS62

CCDS

This transcript is a member of the Human CCDS set: CCDS9433

Version

ENST00000349258.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000276383 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.