Transcript: ENST00000552760.1 PWP1-003

Description

PWP1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17015]

Gene Synonyms

IEF-SSP-9502

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 5352 variant alleles and maps to 255 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000412830.3	PWP1-001	2621	501aa	ENSP00000387365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9114	B4DJV5 F8VZ56 Q05BL3 Q13610 Q86X79	NM_007062.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541166.1	PWP1-005	1722	439aa	ENSP00000445249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJV5 F8VZ56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547995.1	PWP1-006	569	98aa	ENSP00000447770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZ56	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552760.1	PWP1-003	851	147aa	ENSP00000448227.1	Nonsense mediated decay		Q7Z3X9	-	-
ENST00000547120.1	PWP1-007	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 851 bps, Translation length: 147 residues

Version

ENST00000552760.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406541 (version 1)