Transcript: ENST00000359949.7 P2RX4-002

Description

purinergic receptor P2X, ligand-gated ion channel, 4 [Source:HGNC Symbol;Acc:8535]

Gene Synonyms

P2X4, P2X4R

Location

Chromosome 12: 121,647,868-121,671,873 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 22 domains and features, is associated with 11566 variant alleles and maps to 458 oligo probes.

Gene

This transcript is a product of gene ENSG00000135124.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337233.4	P2RX4-001	2032	388aa	ENSP00000336607.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9214	B7Z4R5 B7Z6W8 F5CTF4 K4KBD6 Q99571	NM_002560.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359949.7	P2RX4-002	1836	404aa	ENSP00000353032.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58282	B7Z4R5 E7EPF7 F5CTF4 K4KBD6	NM_001256796.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543171.1	P2RX4-202	1612	287aa	ENSP00000438131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z4R5 F5CTF4 K4KBD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542067.1	P2RX4-005	1084	361aa	ENSP00000438329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5CTF4 F6RU17 K4KBD6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541532.1	P2RX4-201	986	146aa	ENSP00000443115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z1M5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538701.1	P2RX4-011	451	145aa	ENSP00000444033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1M6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543984.1	P2RX4-009	1612	52aa	ENSP00000439386.1	Nonsense mediated decay		F5H2S3	-	-
ENST00000543318.1	P2RX4-006	1429	148aa	ENSP00000444274.1	Nonsense mediated decay		F5GZQ9	-	-
ENST00000538417.1	P2RX4-014	866	123aa	ENSP00000437396.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540930.1	P2RX4-010	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000314442.7	P2RX4-013	4658	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000499638.2	P2RX4-004	3145	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543430.1	P2RX4-008	1436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000397924.2	P2RX4-007	880	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541187.1	P2RX4-012	823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,836 bps, Translation length: 404 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58282

Version

ENST00000359949.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402546 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000359949.7 P2RX4-002

Summary