Transcript: ENST00000257181.9 PRPF38A-002

Description

pre-mRNA processing factor 38A [Source:HGNC Symbol;Acc:25930]

Gene Synonyms

FLJ14936, Prp38, RP5-965L7.1

Location

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 7302 variant alleles and maps to 566 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257181.9	PRPF38A-002	5274	312aa	ENSP00000257181.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS567	Q8NAV1	NM_032864.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474048.1	PRPF38A-003	1059	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487160.1	PRPF38A-001	926	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,274 bps, Translation length: 312 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NAV1

CCDS

This transcript is a member of the Human CCDS set: CCDS567

Version

ENST00000257181.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000022459 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.