Transcript: ENST00000540393.2 RAP1GAP2-003

Description

RAP1 GTPase activating protein 2 [Source:HGNC Symbol;Acc:29176]

Gene Synonyms

GARNL4, KIAA1039, RAP1GA2, RAP1GA3

Location

Chromosome 17: 2,680,350-2,937,501 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 8 domains and features, is associated with 124834 variant alleles and maps to 626 oligo probes.

Gene

This transcript is a product of gene ENSG00000132359.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254695.8	RAP1GAP2-001	6661	730aa	ENSP00000254695.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45573	Q684P5	NM_015085.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366401.4	RAP1GAP2-002	6616	715aa	ENSP00000389824.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45574	Q684P5	NM_001100398.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540393.2	RAP1GAP2-003	3218	711aa	ENSP00000439688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q684P5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542807.1	RAP1GAP2-201	3110	730aa	ENSP00000444890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45573	Q684P5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574709.1	RAP1GAP2-006	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574515.1	RAP1GAP2-007	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571555.1	RAP1GAP2-010	4658	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575979.1	RAP1GAP2-004	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 23, Transcript length: 3,218 bps, Translation length: 711 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q684P5

Version

ENST00000540393.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438367 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000540393.2 RAP1GAP2-003

Summary