Transcript: ENST00000369258.4 CHD1L-001

Description

chromodomain helicase DNA binding protein 1-like [Source:HGNC Symbol;Acc:1916]

Gene Synonyms

ALC1, CHDL

Location

Chromosome 1: 146,714,334-146,767,443 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 22 domains and features, is associated with 25496 variant alleles and maps to 837 oligo probes.

Gene

This transcript is a product of gene ENSG00000131778.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369258.4	CHD1L-001	2967	897aa	ENSP00000358262.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS927	B5MDZ7 Q86WJ1	NM_024568.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431239.1	CHD1L-203	2726	803aa	ENSP00000389031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361293.5	CHD1L-201	2413	616aa	ENSP00000355100.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58022	B5MDZ7	NM_001256337.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369259.3	CHD1L-202	2396	693aa	ENSP00000358263.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58021	B5MDZ7 Q86WJ1	NM_001256338.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467213.1	CHD1L-002	2782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488864.1	CHD1L-003	947	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492728.1	CHD1L-004	662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469625.1	CHD1L-006	414	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485113.1	CHD1L-005	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 2,967 bps, Translation length: 897 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86WJ1

CCDS

This transcript is a member of the Human CCDS set: CCDS927

Version

ENST00000369258.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040377 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000369258.4 CHD1L-001

Summary