Transcript: ENST00000472541.1 ACAP3-002

Description

ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [Source:HGNC Symbol;Acc:16754]

Gene Synonyms

CENTB5, KIAA1716

Location

Chromosome 1: 1,234,124-1,244,989 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 7542 variant alleles and maps to 346 oligo probes.

Gene

This transcript is a product of gene ENSG00000131584.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354700.5	ACAP3-001	3896	834aa	ENSP00000346733.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19	Q8N2W2 Q8WTZ1 Q96P50	NM_030649.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353662.3	ACAP3-201	3660	759aa	ENSP00000321139.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N2W2 Q96P50	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354980.3	ACAP3-012	582	52aa	ENSP00000347075.2	Nonsense mediated decay		F8W850	-	-
ENST00000379037.2	ACAP3-009	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000438966.1	ACAP3-005	265	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492936.1	ACAP3-004	5319	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467278.1	ACAP3-003	2725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478065.1	ACAP3-007	2393	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472541.1	ACAP3-002	1946	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476572.1	ACAP3-011	819	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479108.1	ACAP3-006	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470659.1	ACAP3-010	421	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493992.1	ACAP3-008	326	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,946 bps,

Version

ENST00000472541.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000006367 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000472541.1 ACAP3-002

Summary