Transcript: ENST00000253401.6 ARHGEF9-001

Description

Cdc42 guanine nucleotide exchange factor (GEF) 9 [Source:HGNC Symbol;Acc:14561]

Gene Synonyms

ARHDH9, COLLYBISTIN, EIEE8, HPEM-2, KIAA0424, PEM-2, PEM2

Location

Chromosome X: 62,854,847-62,974,993 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 35654 variant alleles and maps to 662 oligo probes.

Gene

This transcript is a product of gene ENSG00000131089.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253401.6	ARHGEF9-001	5413	516aa	ENSP00000253401.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35315	B1AMR3 O43307	NM_015185.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374870.4	ARHGEF9-201	5251	414aa	ENSP00000364004.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55429	O43307	NM_001173480.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437457.2	ARHGEF9-203	4845	463aa	ENSP00000399994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55430	O43307	NM_001173479.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374872.1	ARHGEF9-004	2345	495aa	ENSP00000364006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMR3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374878.1	ARHGEF9-002	2204	478aa	ENSP00000364012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMR4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433323.2	ARHGEF9-202	1059	243aa	ENSP00000404478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DGQ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495564.1	ARHGEF9-003	2290	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466925.1	ARHGEF9-006	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498761.1	ARHGEF9-005	515	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,413 bps, Translation length: 516 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43307

CCDS

This transcript is a member of the Human CCDS set: CCDS35315

Version

ENST00000253401.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056937 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000253401.6 ARHGEF9-001

Summary