Transcript: ENST00000405995.1 PRRC2B-001

Description

proline-rich coiled-coil 2B [Source:HGNC Symbol;Acc:28121]

Gene Synonyms

BAT2L, BAT2L1, KIAA0515, LQFBS-1, MGC10526

Location

Chromosome 9: 134,269,480-134,375,584 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 23 domains and features, is associated with 55534 variant alleles and maps to 1226 oligo probes.

Gene

This transcript is a product of gene ENSG00000130723.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357304.4	PRRC2B-201	11042	2229aa	ENSP00000349856.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48044	B4E3S7 Q5JSZ5 Q5JSZ9	NM_013318.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405995.1	PRRC2B-001	9157	1535aa	ENSP00000384606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E3S7 Q5JSZ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372249.1	PRRC2B-202	6187	268aa	ENSP00000361323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E0S7 Q5JSZ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458550.1	PRRC2B-203	5057	1535aa	ENSP00000398853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E3S7 Q5JSZ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320547.7	PRRC2B-005	4950	178aa	ENSP00000326101.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E0S7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451855.1	PRRC2B-004	1762	588aa	ENSP00000388579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000422467.1	PRRC2B-003	535	178aa	ENSP00000391063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JT00	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000456307.1	PRRC2B-002	525	175aa	ENSP00000400608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JSZ9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000465931.1	PRRC2B-006	5366	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489593.1	PRRC2B-007	797	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 9,157 bps, Translation length: 1,535 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JSZ5

Version

ENST00000405995.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054751 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405995.1 PRRC2B-001

Summary