Transcript: ENST00000447205.1 TUBA4A-003

Description

tubulin, alpha 4a [Source:HGNC Symbol;Acc:12407]

Gene Synonyms

FLJ30169, H2-ALPHA, TUBA1

Location

Chromosome 2: 220,115,916-220,118,076 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 1109 variant alleles and maps to 368 oligo probes.

Gene

This transcript is a product of gene ENSG00000127824.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392088.2	TUBA4A-002	2499	433aa	ENSP00000375938.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63131	A8MUB1 C9JDS9 C9JEV8 C9JQ00	NM_001278552.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000248437.4	TUBA4A-001	2162	448aa	ENSP00000248437.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2438	A8MUB1 C9JDS9 C9JEV8 C9JQ00 P68366	NM_006000.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427737.1	TUBA4A-010	940	180aa	ENSP00000408194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEV8 C9JQ00	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000456818.1	TUBA4A-004	673	198aa	ENSP00000416992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEV8 C9JJQ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447205.1	TUBA4A-003	648	153aa	ENSP00000396061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000398989.2	TUBA4A-011	615	156aa	ENSP00000396212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDS9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425551.1	TUBA4A-009	565	119aa	ENSP00000404740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498660.1	TUBA4A-006	790	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462806.1	TUBA4A-007	804	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475683.1	TUBA4A-005	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 648 bps, Translation length: 153 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000447205.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259056 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000447205.1 TUBA4A-003

Summary