Transcript: ENST00000590268.1 PPP1R12C-009

Description

protein phosphatase 1, regulatory subunit 12C [Source:HGNC Symbol;Acc:14947]

Gene Synonyms

DKFZP434D0412, LENG3, MBS85, p84, p85

Location

Chromosome 19: 55,602,576-55,603,966 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1032 variant alleles and maps to 291 oligo probes.

Gene

This transcript is a product of gene ENSG00000125503.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263433.3	PPP1R12C-001	2924	782aa	ENSP00000263433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12916	Q9BZL4	NM_017607.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376393.2	PPP1R12C-201	2733	719aa	ENSP00000365573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MEC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435544.2	PPP1R12C-002	2363	707aa	ENSP00000387833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DME2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592993.1	PPP1R12C-006	2269	737aa	ENSP00000465957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591938.1	PPP1R12C-003	1262	234aa	ENSP00000468148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586992.1	PPP1R12C-004	4141	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590268.1	PPP1R12C-009	830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592754.1	PPP1R12C-005	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586197.1	PPP1R12C-007	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588277.1	PPP1R12C-008	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 830 bps,

Version

ENST00000590268.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451815 (version 2)

Annotation Attributes

retained intron CDS [Definitions]

Favourite species

All species

Recent locations

Transcript: ENST00000590268.1 PPP1R12C-009

Summary