Transcript: ENST00000243077.3 LRP1-001

Description

low density lipoprotein receptor-related protein 1 [Source:HGNC Symbol;Acc:6692]

Gene Synonyms

A2MR, APOER, APR, CD91, IGFBP3R, LRP, LRP1A, TGFBR5

Location

Chromosome 12: 57,522,282-57,607,134 forward strand.

About this transcript

This transcript has 89 exons, is annotated with 400 domains and features, is associated with 39927 variant alleles and maps to 2367 oligo probes.

Gene

This transcript is a product of gene ENSG00000123384.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243077.3	LRP1-001	14897	4544aa	ENSP00000243077.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8932	Q07954 Q6LAF4 Q6LBN5	NM_002332.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554174.1	LRP1-004	2175	439aa	ENSP00000451737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PJ72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338962.4	LRP1-003	2169	292aa	ENSP00000341264.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86SW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553277.1	LRP1-002	1693	296aa	ENSP00000451449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7K9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555124.1	LRP1-009	550	183aa	ENSP00000451012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJ88	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000554118.1	LRP1-012	418	139aa	ENSP00000451622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553446.1	LRP1-006	292	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556356.1	LRP1-007	5114	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556830.1	LRP1-005	1847	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000451724.2	LRP1-010	1284	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556247.1	LRP1-011	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555941.1	LRP1-008	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 89, Coding exons: 89, Transcript length: 14,897 bps, Translation length: 4,544 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q07954

CCDS

This transcript is a member of the Human CCDS set: CCDS8932

Version

ENST00000243077.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000412772 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000243077.3 LRP1-001

Summary