Transcript: ENST00000544231.1 SSPN-006

Description

sarcospan [Source:HGNC Symbol;Acc:11322]

Gene Synonyms

DAGA5, KRAG, NSPN, SPN1, SPN2

Location

Chromosome 12: 26,348,289-26,440,671 forward strand.

About this transcript

This transcript has 4 exons, is associated with 38350 variant alleles and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSG00000123096.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242729.2	SSPN-001	2788	243aa	ENSP00000242729.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8707	F5H381 Q14714	NM_005086.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422622.2	SSPN-003	2503	140aa	ENSP00000396087.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44850	F5H381 Q14714	NM_001135823.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540266.1	SSPN-009	587	140aa	ENSP00000442893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44850	F5H381 Q14714	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538142.1	SSPN-007	553	120aa	ENSP00000445360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H381	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535504.1	SSPN-008	419	128aa	ENSP00000438801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0K2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539019.1	SSPN-002	1356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544231.1	SSPN-006	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534829.1	SSPN-005	380	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000544231.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402720 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000544231.1 SSPN-006

Summary