Transcript: ENST00000602899.1 PROSER1-010

Description

proline and serine rich 1 [Source:HGNC Symbol;Acc:20291]

Gene Synonyms

C13orf23, FLJ12661, KIAA2032, bA50D16.2

Location

Chromosome 13: 39,588,540-39,592,136 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1467 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSG00000120685.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000352251.3	PROSER1-003	5168	944aa	ENSP00000332034.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9368	Q86XN7	NM_025138.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350125.3	PROSER1-201	5141	922aa	ENSP00000339123.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NJ97 Q5JS36	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418503.1	PROSER1-001	898	101aa	ENSP00000413879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JS36	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484434.3	PROSER1-004	2150	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468017.1	PROSER1-007	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602534.1	PROSER1-008	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602899.1	PROSER1-010	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602512.1	PROSER1-009	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492646.1	PROSER1-002	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000436678.1	PROSER1-006	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496138.2	PROSER1-005	418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 574 bps,

Version

ENST00000602899.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467370 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000602899.1 PROSER1-010

Summary