Transcript: ENST00000536173.1 LRMP-008

Description

lymphoid-restricted membrane protein [Source:HGNC Symbol;Acc:6690]

Gene Synonyms

JAW1

Location

Chromosome 12: 25,205,521-25,261,268 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 5 domains and features, is associated with 25313 variant alleles and maps to 640 oligo probes.

Gene

This transcript is a product of gene ENSG00000118308.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354454.3	LRMP-003	2504	499aa	ENSP00000346442.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8701	F5H006 F8VRE4 F8W9L6 G3V2F6 G3V513 Q12912	NM_006152.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547044.1	LRMP-005	2208	499aa	ENSP00000450246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8701	F5H006 F8VRE4 F8W9L6 G3V2F6 G3V513 Q12912	NM_001204126.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548766.1	LRMP-002	2193	499aa	ENSP00000446496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8701	F5H006 F8VRE4 F8W9L6 G3V2F6 G3V513 Q12912	NM_001204127.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536173.1	LRMP-008	2120	446aa	ENSP00000444056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H006	-	-
ENST00000550945.1	LRMP-006	1426	118aa	ENSP00000448534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRE4 G3V2F6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557489.1	LRMP-007	1253	120aa	ENSP00000452116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRE4 G3V2F6 G3V513	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554942.1	LRMP-012	785	76aa	ENSP00000450634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2F6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556887.1	LRMP-011	759	8aa	ENSP00000451048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555885.1	LRMP-019	463	69aa	ENSP00000450767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000361433.2	LRMP-001	2715	348aa	ENSP00000354805.2	Nonsense mediated decay		F8VRE4 F8W9L6 G3V2F6 G3V513	-	-
ENST00000555877.1	LRMP-018	888	97aa	ENSP00000451196.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554272.1	LRMP-013	846	62aa	ENSP00000451159.1	Nonsense mediated decay		G3V3C2	-	-
ENST00000556485.1	LRMP-009	966	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557270.1	LRMP-015	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557472.1	LRMP-016	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555141.1	LRMP-010	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555165.1	LRMP-014	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000549437.1	LRMP-004	2544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553398.1	LRMP-017	816	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555194.1	LRMP-020	359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 14, Transcript length: 2,120 bps, Translation length: 446 residues

Version

ENST00000536173.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000409925 (version 1)

Favourite species

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Recent locations

Transcript: ENST00000536173.1 LRMP-008

Summary