Transcript: ENST00000478856.1 NIT2-007

Description

nitrilase family, member 2 [Source:HGNC Symbol;Acc:29878]

Gene Synonyms

HEL-S-8a

Location

About this transcript

This transcript has 6 exons, is associated with 6709 variant alleles and maps to 203 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394140.4	NIT2-001	2520	276aa	ENSP00000377696.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33806	Q9NQR4	NM_020202.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497785.1	NIT2-002	795	265aa	ENSP00000419189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000460317.1	NIT2-003	648	44aa	ENSP00000419239.1	Nonsense mediated decay		F8WF58	-	-
ENST00000480073.1	NIT2-005	625	92aa	ENSP00000419157.1	Nonsense mediated decay		F8WF70	-	-
ENST00000478856.1	NIT2-007	1655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465368.1	NIT2-004	1469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472392.1	NIT2-006	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,655 bps,

Version

ENST00000478856.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353148 (version 1)