Transcript: ENST00000514849.1 SLC4A9-006

Description

solute carrier family 4, sodium bicarbonate cotransporter, member 9 [Source:HGNC Symbol;Acc:11035]

Gene Synonyms

AE4, SBC5

Location

Chromosome 5: 139,745,442-139,747,313 forward strand.

About this transcript

This transcript has 3 exons, is associated with 868 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000113073.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000230993.6	SLC4A9-201	3343	983aa	ENSP00000230993.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58973	Q96Q91	NM_001258428.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506757.2	SLC4A9-001	3277	959aa	ENSP00000424424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47278	Q96Q91	NM_031467.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507527.1	SLC4A9-002	3258	983aa	ENSP00000427661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58973	Q96Q91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432095.2	SLC4A9-004	3086	945aa	ENSP00000410056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58975	Q96Q91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506545.1	SLC4A9-003	2838	896aa	ENSP00000422855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58974	Q96Q91	NM_001258427.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504742.1	SLC4A9-005	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514849.1	SLC4A9-006	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 589 bps,

Version

ENST00000514849.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372827 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000514849.1 SLC4A9-006

Summary