Transcript: ENST00000264638.4 CNTNAP1-001

Description

contactin associated protein 1 [Source:HGNC Symbol;Acc:8011]

Gene Synonyms

CASPR, CNTNAP, Caspr, NRXN4, P190, p190

Location

About this transcript

This transcript has 24 exons, is annotated with 45 domains and features, is associated with 8614 variant alleles and maps to 716 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264638.4	CNTNAP1-001	5276	1384aa	ENSP00000264638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11436	P78357	NM_003632.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591662.1	CNTNAP1-002	4499	740aa	ENSP00000466571.1	Nonsense mediated decay		K7EMM9	-	-
ENST00000586801.1	CNTNAP1-004	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585534.1	CNTNAP1-003	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 5,276 bps, Translation length: 1,384 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78357

CCDS

This transcript is a member of the Human CCDS set: CCDS11436

Version

ENST00000264638.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452342 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.