Transcript: ENST00000368815.2 EDRF1-008

Description

erythroid differentiation regulatory factor 1 [Source:HGNC Symbol;Acc:24640]

Gene Synonyms

C10orf137, DKFZp586F1019, FLJ21617

Location

Chromosome 10: 127,408,145-127,452,220 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 10 domains and features, is associated with 18599 variant alleles and maps to 754 oligo probes.

Gene

This transcript is a product of gene ENSG00000107938.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337623.3	EDRF1-001	4387	1204aa	ENSP00000336727.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7646	Q3B7T1	NM_015608.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356792.4	EDRF1-007	4128	1238aa	ENSP00000349244.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55733	Q3B7T1	NM_001202438.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368813.1	EDRF1-002	1095	317aa	ENSP00000357803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y353 Q9H700	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419769.2	EDRF1-006	4243	796aa	ENSP00000396544.2	Nonsense mediated decay		Q3B7T1	-	-
ENST00000481600.1	EDRF1-003	4181	343aa	ENSP00000431902.1	Nonsense mediated decay		E9PJ07	-	-
ENST00000368815.2	EDRF1-008	4123	593aa	ENSP00000357805.2	Nonsense mediated decay		Q3B7T1	-	-
ENST00000530795.1	EDRF1-010	945	151aa	ENSP00000432229.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525358.1	EDRF1-013	436	23aa	ENSP00000432102.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525091.1	EDRF1-009	4211	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000368812.1	EDRF1-004	1380	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469725.1	EDRF1-005	1174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527655.1	EDRF1-012	851	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525524.1	EDRF1-011	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 14, Transcript length: 4,123 bps, Translation length: 593 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3B7T1

Version

ENST00000368815.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388540 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000368815.2 EDRF1-008

Summary