Transcript: ENST00000379883.2 DDX58-001

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:HGNC Symbol;Acc:19102]

Gene Synonyms

DKFZp434J1111, FLJ13599, RIG-I, RIGI, RLR-1

Location

About this transcript

This transcript has 18 exons, is annotated with 19 domains and features, is associated with 30997 variant alleles and maps to 715 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379882.1	DDX58-201	4621	880aa	ENSP00000369212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A376 O95786	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379883.2	DDX58-001	4353	925aa	ENSP00000369213.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6526	A2A376 O95786	NM_014314.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379868.1	DDX58-002	4089	722aa	ENSP00000369197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A376	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542096.1	DDX58-202	3253	854aa	ENSP00000442160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A376 B3KWW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545044.1	DDX58-203	2122	536aa	ENSP00000443055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5W6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,353 bps, Translation length: 925 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95786

CCDS

This transcript is a member of the Human CCDS set: CCDS6526

Version

ENST00000379883.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052011 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.