Transcript: ENST00000376718.3 PRUNE2-003

Description

prune homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:25209]

Gene Synonyms

A214N16.3, BMCC1, BNIPXL, C9orf65, KIAA0367, RP11-58J3.2, bA214N16.3

Location

Chromosome 9: 79,226,293-79,521,003 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features, is associated with 123334 variant alleles and maps to 890 oligo probes.

Gene

This transcript is a product of gene ENSG00000106772.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000428286.1	PRUNE2-202	12587	2730aa	ENSP00000397425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376718.3	PRUNE2-003	12584	3088aa	ENSP00000365908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47982	Q8WUY3	NM_015225.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426088.1	PRUNE2-006	7434	2384aa	ENSP00000389706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376717.2	PRUNE2-007	4308	353aa	ENSP00000365907.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JUB8	-	-
ENST00000443509.2	PRUNE2-203	1530	337aa	ENSP00000393843.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376713.3	PRUNE2-011	1069	298aa	ENSP00000365903.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000223609.6	PRUNE2-201	1063	324aa	ENSP00000223609.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424866.1	PRUNE2-010	903	260aa	ENSP00000393657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JUB9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466266.2	PRUNE2-004	2698	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492157.1	PRUNE2-012	1264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480674.1	PRUNE2-009	898	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488346.1	PRUNE2-001	791	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464414.1	PRUNE2-005	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489555.1	PRUNE2-013	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494975.1	PRUNE2-002	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 12,584 bps, Translation length: 3,088 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WUY3

CCDS

This transcript is a member of the Human CCDS set: CCDS47982

Version

ENST00000376718.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052730 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000376718.3 PRUNE2-003

Summary