Transcript: ENST00000340011.5 SPAM1-002

Description

sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) [Source:HGNC Symbol;Acc:11217]

Gene Synonyms

HEL-S-96n, HYA1, HYAL1, HYAL3, HYAL5, PH-20, PH20, SPAG15

Location

Chromosome 7: 123,565,368-123,611,468 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 18653 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSG00000106304.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340011.5	SPAM1-002	2349	511aa	ENSP00000345849.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5790	C9J2X5 P38567	NM_003117.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439500.1	SPAM1-001	2220	509aa	ENSP00000402123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	NM_001174046.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460182.1	SPAM1-005	2154	509aa	ENSP00000417934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	NM_001174044.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000223028.7	SPAM1-201	2007	509aa	ENSP00000223028.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402183.2	SPAM1-202	1969	509aa	ENSP00000386028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	NM_153189.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413927.1	SPAM1-003	760	80aa	ENSP00000391491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2X5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 2,349 bps, Translation length: 511 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P38567

CCDS

This transcript is a member of the Human CCDS set: CCDS5790

Version

ENST00000340011.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000348310 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340011.5 SPAM1-002

Summary