Transcript: ENST00000422643.1 EPHB6-004

Description

EPH receptor B6 [Source:HGNC Symbol;Acc:3396]

Gene Synonyms

HEP

Location

Chromosome 7: 142,560,513-142,568,840 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 10 domains and features, is associated with 6299 variant alleles and maps to 752 oligo probes.

Gene

This transcript is a product of gene ENSG00000106123.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392957.2	EPHB6-201	4043	1021aa	ENSP00000376684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5873	O15197	NM_004445.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442129.1	EPHB6-001	4008	1021aa	ENSP00000410789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5873	O15197	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411471.2	EPHB6-202	2425	744aa	ENSP00000409061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQU5	NM_001280795.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425995.1	EPHB6-003	3858	50aa	ENSP00000411175.1	Nonsense mediated decay		F8WBX3	-	-
ENST00000422643.1	EPHB6-004	3126	183aa	ENSP00000404786.1	Nonsense mediated decay		F8WCM8	-	-
ENST00000476059.1	EPHB6-008	655	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497095.1	EPHB6-009	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466783.1	EPHB6-002	4406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486511.1	EPHB6-005	2300	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471581.1	EPHB6-007	475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 4, Transcript length: 3,126 bps, Translation length: 183 residues

Version

ENST00000422643.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341332 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000422643.1 EPHB6-004

Summary