Transcript: ENST00000389297.4 C7orf63-001

Description

chromosome 7 open reading frame 63 [Source:HGNC Symbol;Acc:26107]

Gene Synonyms

FLJ21062

Location

Chromosome 7: 89,874,488-89,940,377 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 8 domains and features, is associated with 26726 variant alleles and maps to 809 oligo probes.

Gene

This transcript is a product of gene ENSG00000105792.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389297.4	C7orf63-001	3902	941aa	ENSP00000373948.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43613	A5D8W1 F8WBX7	NM_001160138.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316089.8	C7orf63-201	3762	895aa	ENSP00000321753.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A5D8W1 F8WBX7 H7BZV2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497910.1	C7orf63-013	3032	923aa	ENSP00000419549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55122	A5D8W1 F8WBX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457170.2	C7orf63-005	1545	515aa	ENSP00000392365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C002	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000449577.1	C7orf63-007	1489	478aa	ENSP00000391571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZV2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000445156.1	C7orf63-012	611	93aa	ENSP00000414772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412839.1	C7orf63-011	573	170aa	ENSP00000415818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418199.1	C7orf63-008	526	89aa	ENSP00000393339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451029.1	C7orf63-002	2614	229aa	ENSP00000411234.1	Nonsense mediated decay		A5D8W1 F8WBX7	-	-
ENST00000427396.1	C7orf63-004	2299	119aa	ENSP00000411143.1	Nonsense mediated decay		F8WBX7	-	-
ENST00000463311.1	C7orf63-003	684	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485791.1	C7orf63-014	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475031.1	C7orf63-006	6966	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491886.1	C7orf63-009	439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,902 bps, Translation length: 941 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5D8W1

CCDS

This transcript is a member of the Human CCDS set: CCDS43613

Version

ENST00000389297.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000139891 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000389297.4 C7orf63-001

Summary