Transcript: ENST00000423620.2 ESRP1-003

Description

epithelial splicing regulatory protein 1 [Source:HGNC Symbol;Acc:25966]

Gene Synonyms

FLJ20171, RBM35A, RMB35A

Location

Chromosome 8: 95,653,302-95,719,694 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 21 domains and features, is associated with 30279 variant alleles and maps to 628 oligo probes.

Gene

This transcript is a product of gene ENSG00000104413.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000433389.2	ESRP1-001	3770	681aa	ENSP00000405738.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47897	E5RGE9 E5RI26 Q6NXG1	NM_017697.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358397.5	ESRP1-002	3756	677aa	ENSP00000351168.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47898	E5RGE9 E5RI26 Q6NXG1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423620.2	ESRP1-003	3746	659aa	ENSP00000407349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47895	E5RGE9 E5RI26 Q6NXG1	NM_001122826.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454170.2	ESRP1-004	3482	608aa	ENSP00000402766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47896	E5RGE9 E5RI26 Q6NXG1	NM_001122827.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519505.1	ESRP1-005	3068	502aa	ENSP00000430118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGE9 E5RI26	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000517610.1	ESRP1-006	2139	522aa	ENSP00000429125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGE9 E5RI26 H0YBB3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520385.1	ESRP1-008	764	24aa	ENSP00000430207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGE9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522756.1	ESRP1-009	609	94aa	ENSP00000428490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI26	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523347.1	ESRP1-007	1813	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517556.1	ESRP1-011	457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522920.1	ESRP1-010	402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,746 bps, Translation length: 659 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NXG1

CCDS

This transcript is a member of the Human CCDS set: CCDS47895

Version

ENST00000423620.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379325 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000423620.2 ESRP1-003

Summary