Transcript: ENST00000287507.3 BCKDK-003

Description

branched chain ketoacid dehydrogenase kinase [Source:HGNC Symbol;Acc:16902]

Gene Synonyms

BCKDKD, BDK

Location

Chromosome 16: 31,119,615-31,123,888 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 2324 variant alleles and maps to 496 oligo probes.

Gene

This transcript is a product of gene ENSG00000103507.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394951.1	BCKDK-004	2164	412aa	ENSP00000378405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10705	A8MY43 H3BNP3 H3BQP2 O14874	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000219794.6	BCKDK-001	2126	412aa	ENSP00000219794.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10705	A8MY43 H3BNP3 H3BQP2 O14874	NM_005881.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394950.3	BCKDK-002	1997	365aa	ENSP00000378404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45467	A8MY43 H3BNP3 H3BQP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000287507.3	BCKDK-003	1907	335aa	ENSP00000287507.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61917	H3BNP3 H3BQP2 Q96G95	NM_001271926.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484226.2	BCKDK-010	754	216aa	ENSP00000457226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNP3 H3BQP2 H3BTL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561755.1	BCKDK-007	640	60aa	ENSP00000455866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567676.1	BCKDK-008	554	88aa	ENSP00000454947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNP3 H3BQP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567682.1	BCKDK-009	439	146aa	ENSP00000457821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000567530.1	BCKDK-006	1796	217aa	ENSP00000456479.1	Nonsense mediated decay		H3BNP3 H3BQP2 H3BS02	-	-
ENST00000566568.1	BCKDK-005	2558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,907 bps, Translation length: 335 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS61917

Version

ENST00000287507.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000108513 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000287507.3 BCKDK-003

Summary