Transcript: ENST00000380617.3 KATNAL1-002

Description

katanin p60 subunit A-like 1 [Source:HGNC Symbol;Acc:28361]

Gene Synonyms

MGC2599

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 44083 variant alleles and maps to 304 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380615.3	KATNAL1-001	7551	490aa	ENSP00000369989.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31956	A2A3H2 Q5T558 Q9BW62	NM_032116.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380617.3	KATNAL1-002	1634	490aa	ENSP00000369991.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31956	A2A3H2 Q5T558 Q9BW62	NM_001014380.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441394.1	KATNAL1-003	797	150aa	ENSP00000407792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T558	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414289.1	KATNAL1-004	566	153aa	ENSP00000397776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3H2 Q5T558	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480854.1	KATNAL1-005	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,634 bps, Translation length: 490 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BW62

CCDS

This transcript is a member of the Human CCDS set: CCDS31956

Version

ENST00000380617.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000125962 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.