Transcript: ENST00000466143.1 ARHGEF7-013

Description

Rho guanine nucleotide exchange factor (GEF) 7 [Source:HGNC Symbol;Acc:15607]

Gene Synonyms

BETA-PIX, COOL-1, COOL1, DKFZp686C12170, DKFZp761K1021, KIAA0142, Nbla10314, P50, P50BP, P85, P85COOL1, P85SPR, PAK3, PAK3BP, PIXB

Location

Chromosome 13: 111,806,036-111,935,573 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 23 domains and features, is associated with 58407 variant alleles and maps to 380 oligo probes.

Gene

This transcript is a product of gene ENSG00000102606.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375741.2	ARHGEF7-204	5525	803aa	ENSP00000364893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45068	B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ3	NM_145735.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375739.2	ARHGEF7-203	5375	753aa	ENSP00000364891.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45069	B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ3	NM_001113512.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000218789.5	ARHGEF7-001	5233	705aa	ENSP00000218789.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ALK7 B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q5ZEZ2 Q5ZEZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375736.4	ARHGEF7-007	5032	646aa	ENSP00000364888.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9521	B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ2 Q5ZEZ3	NM_003899.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375723.1	ARHGEF7-005	4957	625aa	ENSP00000364875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426073.2	ARHGEF7-004	4921	646aa	ENSP00000397068.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9521	B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ2 Q5ZEZ3	NM_001113513.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370623.3	ARHGEF7-201	4814	731aa	ENSP00000359657.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ2 Q5ZEZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317133.5	ARHGEF7-008	4361	782aa	ENSP00000325994.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32009	B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q14155 Q5ZEZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375737.5	ARHGEF7-202	2400	721aa	ENSP00000364889.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANY6 B7Z6G2 C9JAD7 C9JDI6 E7EUY6 Q5ZEZ2 Q5ZEZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478679.1	ARHGEF7-011	1833	547aa	ENSP00000417596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466143.1	ARHGEF7-013	1681	447aa	ENSP00000418067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANY6 C9JAD7 C9JDI6 E7EUY6 Q5ZEZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544132.1	ARHGEF7-205	1501	181aa	ENSP00000445384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z6D9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467053.1	ARHGEF7-016	691	61aa	ENSP00000420592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAD7 C9JDI6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449979.1	ARHGEF7-003	682	66aa	ENSP00000406732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANY6 C9JAD7 C9JDI6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491775.1	ARHGEF7-015	581	39aa	ENSP00000418043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAD7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426768.2	ARHGEF7-009	481	143aa	ENSP00000389890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANY6 C9JAD7 C9JDI6 E7ENL8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469877.1	ARHGEF7-012	1501	151aa	ENSP00000418235.1	Nonsense mediated decay		B1ANY6 C9JAD7 C9JDI6 E7EU80	-	-
ENST00000483189.1	ARHGEF7-010	1205	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491688.1	ARHGEF7-006	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483540.1	ARHGEF7-014	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000422836.2	ARHGEF7-017	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 12, Transcript length: 1,681 bps, Translation length: 447 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000466143.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355106 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000466143.1 ARHGEF7-013

Summary