Transcript: ENST00000217131.5 CTSZ-001

Description

cathepsin Z [Source:HGNC Symbol;Acc:2547]

Gene Synonyms

CTSX

Location

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 6050 variant alleles and maps to 334 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000217131.5	CTSZ-001	1495	303aa	ENSP00000217131.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13474	Q9UBR2	NM_001336.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503833.2	CTSZ-005	955	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488395.1	CTSZ-002	647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472025.1	CTSZ-003	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,495 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBR2

CCDS

This transcript is a member of the Human CCDS set: CCDS13474

Version

ENST00000217131.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079899 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.