Transcript: ENST00000558506.1 EIF5-003

Description

eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:3299]

Gene Synonyms

EIF-5, EIF-5A

Location

Chromosome 14: 103,801,286-103,809,565 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 5481 variant alleles and maps to 847 oligo probes.

Gene

This transcript is a product of gene ENSG00000100664.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216554.3	EIF5-001	5945	431aa	ENSP00000216554.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9980	H0YK11 H0YK29 H0YLZ1 H0YM54 H0YMJ8 H0YN40 P55010	NM_001969.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558506.1	EIF5-003	4384	431aa	ENSP00000453743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9980	H0YK11 H0YK29 H0YLZ1 H0YM54 H0YMJ8 H0YN40 P55010	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392715.2	EIF5-002	3417	431aa	ENSP00000376477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9980	H0YK11 H0YK29 H0YLZ1 H0YM54 H0YMJ8 H0YN40 P55010	NM_183004.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558265.1	EIF5-011	872	200aa	ENSP00000453856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK11 H0YK29 H0YLZ1 H0YM54 H0YMJ8 H0YN40	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560763.1	EIF5-008	723	51aa	ENSP00000452636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK29	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558316.1	EIF5-010	719	146aa	ENSP00000453396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK11 H0YK29 H0YLZ1 H0YM54 H0YMJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559532.1	EIF5-014	678	109aa	ENSP00000453468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK11 H0YK29 H0YM54 H0YMJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559130.1	EIF5-013	583	68aa	ENSP00000452615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK11 H0YK29	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560338.1	EIF5-007	580	101aa	ENSP00000453633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK11 H0YK29 H0YMJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561325.1	EIF5-012	569	109aa	ENSP00000452883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK11 H0YK29 H0YM54 H0YMJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560200.1	EIF5-009	776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560877.1	EIF5-005	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561406.1	EIF5-020	384	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561380.1	EIF5-019	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558551.1	EIF5-015	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561439.1	EIF5-016	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559923.1	EIF5-017	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559249.1	EIF5-006	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561023.1	EIF5-021	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558800.1	EIF5-022	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559011.1	EIF5-018	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,384 bps, Translation length: 431 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55010

CCDS

This transcript is a member of the Human CCDS set: CCDS9980

Version

ENST00000558506.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415340 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000558506.1 EIF5-003

Summary