Transcript: ENST00000543680.1 SOS2-002

Description

son of sevenless homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11188]

Location

About this transcript

This transcript has 22 exons, is annotated with 33 domains and features, is associated with 52792 variant alleles and maps to 612 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216373.5	SOS2-001	5489	1332aa	ENSP00000216373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9697	B4DJ05 Q07890	NM_006939.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543680.1	SOS2-002	3960	1299aa	ENSP00000445328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJ05 B7ZKT6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556452.1	SOS2-004	398	70aa	ENSP00000452553.1	Nonsense mediated decay		G3V5W3	-	-
ENST00000555794.1	SOS2-003	2278	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555666.1	SOS2-005	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556469.1	SOS2-006	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,960 bps, Translation length: 1,299 residues

Version

ENST00000543680.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000410706 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.