Transcript: ENST00000397906.2 TTC28-001

Description

tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:29179]

Gene Synonyms

KIAA1043, TPRBK

Location

Chromosome 22: 28,374,004-29,075,853 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 94 domains and features, is associated with 287081 variant alleles and maps to 859 oligo probes.

Gene

This transcript is a product of gene ENSG00000100154.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397906.2	TTC28-001	11793	2481aa	ENSP00000381003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46678	Q96AY4	NM_001145418.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431039.1	TTC28-005	905	301aa	ENSP00000410244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYP5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000442232.1	TTC28-003	499	108aa	ENSP00000388788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYP4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000490475.1	TTC28-007	724	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468807.1	TTC28-002	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469670.1	TTC28-004	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480563.1	TTC28-006	407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 11,793 bps, Translation length: 2,481 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96AY4

CCDS

This transcript is a member of the Human CCDS set: CCDS46678

Version

ENST00000397906.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320930 (version 2)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397906.2 TTC28-001

Summary