Transcript: ENST00000476071.1 NSFL1C-010

Description

NSFL1 (p97) cofactor (p47) [Source:HGNC Symbol;Acc:15912]

Gene Synonyms

P47, UBX1, UBXD10, UBXN2C, dJ776F14.1, p47

Location

Chromosome 20: 1,422,807-1,447,563 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 10625 variant alleles and maps to 683 oligo probes.

Gene

This transcript is a product of gene ENSG00000088833.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216879.4	NSFL1C-002	3568	370aa	ENSP00000216879.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13015	G3V4V8 Q9UNZ2	NM_016143.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381658.4	NSFL1C-202	3451	259aa	ENSP00000371074.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UNZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476071.1	NSFL1C-010	2800	372aa	ENSP00000418529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56175	G3V4V8 Q9UNZ2	NM_001206736.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353088.2	NSFL1C-004	2611	339aa	ENSP00000338643.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13016	G3V4V8 Q9UNZ2	NM_018839.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350991.4	NSFL1C-201	1349	372aa	ENSP00000202584.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4V8 J3QK90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555944.1	NSFL1C-005	2588	35aa	ENSP00000452019.1	Nonsense mediated decay		G3V4V8	-	-
ENST00000381653.5	NSFL1C-003	1446	274aa	ENSP00000434067.1	Nonsense mediated decay		F2Z2K0 G3V4V8	-	-
ENST00000555568.1	NSFL1C-012	863	35aa	ENSP00000451675.1	Nonsense mediated decay		G3V4V8	-	-
ENST00000470376.1	NSFL1C-001	845	71aa	ENSP00000473400.1	Nonsense mediated decay		G3V4V8 R4GMY2	-	-
ENST00000489203.2	NSFL1C-007	694	105aa	ENSP00000473616.1	Nonsense mediated decay		G3V4V8 R4GNE6	-	-
ENST00000461211.1	NSFL1C-006	3799	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553571.1	NSFL1C-013	752	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478168.1	NSFL1C-008	624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487086.1	NSFL1C-009	456	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555359.1	NSFL1C-011	450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,800 bps, Translation length: 372 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UNZ2

CCDS

This transcript is a member of the Human CCDS set: CCDS56175

Version

ENST00000476071.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077533 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000476071.1 NSFL1C-010

Summary