Transcript: ENST00000477114.1 POMGNT1-009

Description

protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:19139]

Gene Synonyms

FLJ20277, GNTI.2, GnT I.2, LGMD2O, MDDGA3, MDDGB3, MDDGC3, MEB, MGAT1.2, gnT-I.2

Location

Chromosome 1: 46,659,055-46,660,323 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 707 variant alleles and maps to 291 oligo probes.

Gene

This transcript is a product of gene ENSG00000085998.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371992.1	POMGNT1-002	2934	748aa	ENSP00000361060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57995	Q5VST3	NM_001243766.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396420.3	POMGNT1-202	3480	200aa	ENSP00000379698.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68CV6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371984.3	POMGNT1-001	2728	660aa	ENSP00000361052.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS531	Q8WZA1	NM_017739.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371986.3	POMGNT1-201	2388	748aa	ENSP00000361054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57995	Q5VST3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535522.1	POMGNT1-203	2355	638aa	ENSP00000443767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H827	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485714.1	POMGNT1-004	2906	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489985.1	POMGNT1-003	1094	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497439.1	POMGNT1-008	846	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477114.1	POMGNT1-009	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463030.1	POMGNT1-007	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480972.1	POMGNT1-006	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475642.1	POMGNT1-005	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 770 bps,

Version

ENST00000477114.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000091327 (version 1)

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Transcript: ENST00000477114.1 POMGNT1-009

Summary