Transcript: ENST00000396625.3 COL4A4-001

Description

collagen, type IV, alpha 4 [Source:HGNC Symbol;Acc:2206]

Gene Synonyms

CA44

Location

About this transcript

This transcript has 48 exons, is annotated with 57 domains and features, is associated with 72452 variant alleles and maps to 1325 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396625.3	COL4A4-001	9895	1690aa	ENSP00000379866.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42828	P53420	NM_000092.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329662.7	COL4A4-201	5272	1687aa	ENSP00000328553.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KNM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 48, Coding exons: 47, Transcript length: 9,895 bps, Translation length: 1,690 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53420

CCDS

This transcript is a member of the Human CCDS set: CCDS42828

Version

ENST00000396625.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000313770 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.