Transcript: ENST00000543641.1 FAM76B-003

Description

family with sequence similarity 76, member B [Source:HGNC Symbol;Acc:28492]

Gene Synonyms

MGC33371

Location

Chromosome 11: 95,502,119-95,522,954 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 5 domains and features, is associated with 10693 variant alleles and maps to 325 oligo probes.

Gene

This transcript is a product of gene ENSG00000077458.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358780.5	FAM76B-002	3952	339aa	ENSP00000351631.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41700	Q5HYJ3	NM_144664.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536839.1	FAM76B-005	2546	338aa	ENSP00000441168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GX09	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537749.1	FAM76B-010	754	47aa	ENSP00000437366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6T9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540054.1	FAM76B-006	730	91aa	ENSP00000442652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H215 F5H6T9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542135.1	FAM76B-007	610	91aa	ENSP00000445612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H215 F5H6T9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000398187.2	FAM76B-001	3823	233aa	ENSP00000381248.2	Nonsense mediated decay		B2R9C2	-	-
ENST00000543641.1	FAM76B-003	1379	233aa	ENSP00000444087.1	Nonsense mediated decay		B2R9C2	-	-
ENST00000538316.1	FAM76B-008	585	49aa	ENSP00000443440.1	Nonsense mediated decay		F5H5F4	-	-
ENST00000538047.1	FAM76B-009	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545654.1	FAM76B-004	2001	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545813.1	FAM76B-012	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541418.1	FAM76B-013	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535919.1	FAM76B-011	451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 8, Transcript length: 1,379 bps, Translation length: 233 residues

Version

ENST00000543641.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395971 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000543641.1 FAM76B-003

Summary