Transcript: ENST00000382361.3 FSCN1-001

Description

fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) [Source:HGNC Symbol;Acc:11148]

Gene Synonyms

FAN1, FLJ38511, HSN, SNL, p55

Location

Chromosome 7: 5,632,454-5,646,286 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 8279 variant alleles and maps to 507 oligo probes.

Gene

This transcript is a product of gene ENSG00000075618.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382361.3	FSCN1-001	2777	493aa	ENSP00000371798.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5342	B3KTM9 C9JFC0 C9JPH9 H7BYX5 Q16658 Q96IH1	NM_003088.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340250.6	FSCN1-201	2722	472aa	ENSP00000339729.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KTM9 C9JFC0 C9JPH9 H7BYX5 J3KNT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447103.1	FSCN1-004	713	120aa	ENSP00000409967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPH9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444748.1	FSCN1-003	580	132aa	ENSP00000404506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFC0 C9JPH9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000405801.2	FSCN1-005	550	137aa	ENSP00000383982.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFC0 C9JPH9 H7BYX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473330.1	FSCN1-002	2215	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,777 bps, Translation length: 493 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16658

CCDS

This transcript is a member of the Human CCDS set: CCDS5342

Version

ENST00000382361.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207153 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000382361.3 FSCN1-001

Summary