Transcript: ENST00000549540.1 SLC6A15-010

Description

solute carrier family 6 (neutral amino acid transporter), member 15 [Source:HGNC Symbol;Acc:13621]

Gene Synonyms

B0AT2, FLJ10316, NTT73, SBAT1, V7-3, hv7-3

Location

Chromosome 12: 85,285,612-85,305,803 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 9451 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSG00000072041.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000450363.3	SLC6A15-002	4229	289aa	ENSP00000390706.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9027	F8VSG1 Q9H2J7	NM_018057.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000266682.5	SLC6A15-001	4044	730aa	ENSP00000266682.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9026	F8VSG1 F8VX16 Q68CX0 Q9H2J7	NM_182767.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309283.7	SLC6A15-004	3108	316aa	ENSP00000311645.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WJN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552192.1	SLC6A15-003	2221	623aa	ENSP00000450145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53816	F8VX16 Q9H2J7	NM_001146335.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551612.1	SLC6A15-007	582	71aa	ENSP00000449263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VX16	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549540.1	SLC6A15-010	563	96aa	ENSP00000448308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551010.1	SLC6A15-011	546	19aa	ENSP00000475035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551388.1	SLC6A15-006	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551818.1	SLC6A15-008	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547240.1	SLC6A15-005	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548267.1	SLC6A15-009	1367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 563 bps, Translation length: 96 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000549540.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405686 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000549540.1 SLC6A15-010

Summary