Transcript: ENST00000369702.4 DDX20-001

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:HGNC Symbol;Acc:2743]

Gene Synonyms

DP103, GEMIN3

Location

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 6222 variant alleles and maps to 493 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000475700.1	DDX20-002	4332	432aa	ENSP00000435660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369702.4	DDX20-001	4212	824aa	ENSP00000358716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS842	Q9UHI6	NM_007204.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536167.1	DDX20-201	1263	138aa	ENSP00000439026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533164.1	DDX20-003	1499	138aa	ENSP00000434085.1	Nonsense mediated decay		B4DWV7	-	-
ENST00000534200.1	DDX20-005	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524894.1	DDX20-004	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,212 bps, Translation length: 824 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHI6

CCDS

This transcript is a member of the Human CCDS set: CCDS842

Version

ENST00000369702.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000033063 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.