Transcript: ENST00000466758.1 ATP11B-006

Description

ATPase, class VI, type 11B [Source:HGNC Symbol;Acc:13553]

Gene Synonyms

ATPIF, ATPIR, KIAA0956

Location

Chromosome 3: 182,591,754-182,636,851 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 4 domains and features, is associated with 18206 variant alleles and maps to 436 oligo probes.

Gene

This transcript is a product of gene ENSG00000058063.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323116.5	ATP11B-001	7325	1177aa	ENSP00000321195.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33896	B4E3T1 Q9Y2G3	NM_014616.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498086.1	ATP11B-004	3259	970aa	ENSP00000418421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491699.2	ATP11B-007	1660	147aa	ENSP00000419768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4L6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493826.1	ATP11B-002	963	195aa	ENSP00000419032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y2G3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482070.1	ATP11B-009	716	238aa	ENSP00000417124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4E6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000484691.1	ATP11B-011	488	119aa	ENSP00000419152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466758.1	ATP11B-006	2390	108aa	ENSP00000417406.1	Nonsense mediated decay		H0Y854	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482794.1	ATP11B-010	738	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475636.1	ATP11B-008	418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490303.1	ATP11B-005	2290	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 4, Transcript length: 2,390 bps, Translation length: 108 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000466758.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350603 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000466758.1 ATP11B-006

Summary