Transcript: ENST00000414362.2 MCF2L2-003

Description

MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:30319]

Gene Synonyms

ARHGEF22, DRG, KIAA0861

Location

Chromosome 3: 182,989,808-183,145,889 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 12 domains and features, is associated with 64888 variant alleles and maps to 374 oligo probes.

Gene

This transcript is a product of gene ENSG00000053524.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328913.3	MCF2L2-001	4980	1114aa	ENSP00000328118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3243	C9J326 Q86YR7	NM_015078.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473233.1	MCF2L2-008	4748	1074aa	ENSP00000420070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J326 Q86YR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414362.2	MCF2L2-003	3031	628aa	ENSP00000414131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J326 Q86YR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447025.2	MCF2L2-004	2394	711aa	ENSP00000388190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J326 Q86YR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482017.1	MCF2L2-010	570	124aa	ENSP00000417345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J326	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468976.1	MCF2L2-012	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488149.1	MCF2L2-005	7813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461074.1	MCF2L2-007	7666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459750.1	MCF2L2-006	3090	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492331.1	MCF2L2-015	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478652.1	MCF2L2-013	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464626.1	MCF2L2-014	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475664.1	MCF2L2-011	460	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,031 bps, Translation length: 628 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YR7

Version

ENST00000414362.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350870 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000414362.2 MCF2L2-003

Summary