Transcript: ENST00000511119.1 BOD1L1-003

Description

biorientation of chromosomes in cell division 1-like 1 [Source:HGNC Symbol;Acc:31792]

Gene Synonyms

BOD1L, FAM44A, FLJ33215, KIAA1327

Location

Chromosome 4: 13,583,854-13,595,144 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 4784 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSG00000038219.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000040738.5	BOD1L1-001	10565	3051aa	ENSP00000040738.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3411	Q8NFC6	NM_148894.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507943.1	BOD1L1-004	1128	207aa	ENSP00000425492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482713.1	BOD1L1-002	4367	93aa	ENSP00000420541.1	Nonsense mediated decay		F8WDD0	-	-
ENST00000511119.1	BOD1L1-003	2049	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505343.1	BOD1L1-006	1202	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509897.1	BOD1L1-005	190	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 2,049 bps,

Version

ENST00000511119.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000359151 (version 1)

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Transcript: ENST00000511119.1 BOD1L1-003

Summary