Transcript: ENST00000310961.5 LRRC7-002

Description

leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:18531]

Gene Synonyms

DENSIN, KIAA1365, LAP1, densin-180

Location

Chromosome 1: 70,034,081-70,589,171 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 64 domains and features, is associated with 237802 variant alleles and maps to 804 oligo probes.

Gene

This transcript is a product of gene ENSG00000033122.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310961.5	LRRC7-002	6507	1495aa	ENSP00000309245.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000035383.5	LRRC7-001	5000	1537aa	ENSP00000035383.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS645	Q96NW7	NM_020794.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415775.2	LRRC7-201	3996	821aa	ENSP00000394867.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WE45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370958.1	LRRC7-003	2375	217aa	ENSP00000359997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000608744.1	LRRC7-010	792	25aa	ENSP00000477399.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000608815.1	LRRC7-007	786	32aa	ENSP00000476307.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588515.1	LRRC7-004	775	61aa	ENSP00000466082.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609498.1	LRRC7-008	712	36aa	ENSP00000476660.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565615.1	LRRC7-005	2983	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609072.1	LRRC7-011	888	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000608470.1	LRRC7-009	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000441830.1	LRRC7-006	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000607936.1	LRRC7-012	2556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 25, Transcript length: 6,507 bps, Translation length: 1,495 residues

Version

ENST00000310961.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000131262 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310961.5 LRRC7-002

Summary